NGS-SA: Genomic and Bioinformatic protocols to SARS-CoV-2

SARS-CoV-2 Sequencing Resources: US CDC resources

Title: SARS-CoV-2 Sequencing Resources: US CDC resources

Authors: US Center for Disease Control (US CDC)

Date: 2020-05-07


This document repository is meant to serve as the start of a crowd-sourced collection of information, documentation, protocols and other resources for public health laboratories intending to sequence SARS-CoV-2 coronavirus samples in the coming weeks. This is admittedly a limited first draft, but will continued to collate useful information as additional protocols, tools, and resources are added, and as best practices are identified. While some of the resources here are directed specifically to US state and local public health laboratories in support of diagnostic testing, sequencing and response, we hope that this is a useful resource for the global laboratory community, as we respond to this pandemic threat.


A) Access Protocol at website (Recommended format)

B) Access Protocol in PDF format (Specific laboratory format)